STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1726Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
ABO_1727
Conserved hypothetical protein.
 
    0.969
ABO_1725
Conserved hypothetical protein; (selenide water dikinase) identified by match to PFAM protein family HMMPF02769 InterPro: AIR synthase related protein.
       0.686
ABO_1724
(phenazine biosynthesis-like protein, putative) identified by match to PFAM protein family HMMPF02567 InterPro: Phenazine biosynthesis PhzC/PhzF protein; Family membership.
       0.672
ABO_1723
Conserved hypothetical protein.
       0.564
ABO_1722
ABC transporter ATP-binding protein; Identified by match to TIGR protein family HMMTIGR00972 InterPro: AAA ATPase superfamily possibly phosphate transporter; Family membership.
       0.553
ABO_1721
Phosphate ABC transporter periplasmicphosphate-binding protein putative identified by sequence similarity; putative; Function unclear.
       0.511
ABO_1729
Conserved hypothetical protein; (potassium efflux system protein KefA putative) identified by sequence similarity; putative InterPro: Uncharacterized protein family UPF0003 shows 36 38dentity to the (aefA) (potassium efflux system protein KefA, putative)in Pseudomonas putida KT2440 (PP5067).
       0.400
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.