Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABO_1783(glycosyl transferase, putative) identified by sequencesimilarity; putative; Family membership. (433 aa)    
Predicted Functional Partners:
ABO_1784
Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership.
 
  
 0.881
ABO_1782
Siderophore biosynthesis protein (transferase for other substituted phosphate groups) putative identified by sequence similarity; putative; Function unclear; Belongs to the P-Pant transferase superfamily.
  
  
 0.797
ABO_2092
(peptide synthetase, putative); identified by sequence similarity; putative; High confidence in function and specificity.
 
   
 0.556
p450-3
(cytochrome P450, putative) identified by sequencesimilarity; putative InterPro: Cytochrome P450 enzyme; High confidence in function and specificity.
 
 
 0.529
ABO_0972
Phosphotransferase-histidinkinase, family protein; Phosphotransferases (with a nitrogenous group as acceptor) identified by match to PFAM protein family HMMPF04171 InterPro: Histidine kinase C-terminal; Family membership.
  
   
 0.477
p450
(oxidoreductase cytochrome p450 family protein) (acting on paired donors with incorporation of molecular oxygen) identified by sequencesimilarity; High confidence in function and specificity.
  
 
 0.464
p450-2
P450, cytochrome p450 (conserved hypothetical protein) very GP:2588989; identified by sequencesimilarity; High confidence in function and specificity.
  
 
 0.464
ABO_1243
Sensor histidine kinase containing HisKA, HATPase_c and Response_reg domains, identified by match to PFAM protein family HMMPF04171 InterPro: Histidine kinase C-terminal; conserved hypothetical protein.
  
   
 0.461
ABO_1598
Sensor histidine kinase identified by match to PFAM protein family HMMPF02518 InterPro: Histidine kinase C-terminal; Function unclear.
  
   
 0.431
ABO_0442
Sensor histidine kinase identified by match to PFAM protein family HMMPF02518 InterPro: Histidine kinase C-terminal; Function unclear.
  
   
 0.420
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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