Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
Genomic Predictions
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gene co-occurrence
gene fusions
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ABO_1849(HlyD family secretion protein) identified by match to TIGR protein family HMMTIGR01730 InterPro: HlyD family secretion protein Gram-negative bacteria produce a number of proteins which are secreted into the growth medium by a mechanism that does not require a cleaved N-terminal signal sequence. These proteins, while having different functions, require the help of two or more proteins for their secretion across the cell envelope. These secretion proteins include members belonging to the ABC transporter family (see the relevant entry IPR003439) and a protein belonging to a family which [...] (368 aa)    
Predicted Functional Partners:
ABO_1848
(ABC transporter, ATP-binding protein/permease protein, putative) identified by match to PFAM protein family HMMPF03772 InterPro: AAA ATPase superfamily; Family membership.
  
 0.972
ABO_1847
(ABC transporter, ATP-binding protein, permease protein, putative) identified by match to TIGR protein family HMMTIGR01291; Family membership.
  
 0.969
macB
ABC transporter, ATP-binding protein/permease, putative; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.811
tolC
(outer membrane efflux protein TolC) belongs to the prtf family of secretion proteins. Pfam: Outer membrane efflux protein, OEP; Family membership.
  
 
 0.526
ABO_0250
Outer membrane protein identified by sequence similarity; putative InterPro: Outer membrane efflux protein; Function unclear.
  
 
 0.506
ABO_0963
InterPro: Outer membrane efflux protein probably a component that vonfers multidrug resistance. could also be implicated in the secretion of the siderophore, pyoverdine. probably involved in the efflux of the siderophore across the outer membrane; Hypothetical protein.
  
 
 0.506
czcC1
Cobalt/zinc/cadmium efflux RND transporter outermembrane protein (CzcC family) identified by sequencesimilarity; putative InterPro: Outer membrane efflux protein; Family membership.
  
 
 0.444
czcC3
(cobalt/zinc/cadmium efflux RND transporter outermembrane protein CzcC family) identified by sequencesimilarity; putative InterPro: Outer membrane efflux protein; conserved hypothetical protein.
  
 
 0.444
czcC
Cation efflux system protein; Identified by match to TIGR protein family HMMTIGR01730; Family membership.
  
 
 0.444
ABO_0248
ABC export system membrane fusion protein identified by sequencesimilarity; putative InterPro: HlyD family secretion protein; Function unclear; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
0.416
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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