Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABO_1865ABC-type transport system involved in Fe-S cluster assembly, permease component; High confidence in function and specificity. (479 aa)    
Predicted Functional Partners:
aapB
ATP-binding protein of ABC-transporter; ABC-type transport system involved in Fe-S cluster assembly, ATPase component; High confidence in function and specificity.
 
 0.999
sufD
Permease component of ABC-tranporter; High confidence in function and specificity; conserved hypothetical protein, putative ABC transporter permease component, possibly involved in Fe-S cluster assembly.
 
0.999
csdA
Cysteine sulfinate desulfinase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.995
sufE
Fe-S metabolism associated domain protein; SufE protein probably involved in Fe-S center assembly; Family membership.
 
 0.961
ABO_1870
Metal-sulfur cluster biosynthetic enzyme, putative; Family membership.
 
   
 0.842
ABO_1081
(aminotransferase, putative) identified by sequencesimilarity; putative InterPro: Aminotransferase class-V; Family membership.
 
 
 0.776
iscA
Iron-binding protein IscA; Identified by sequence similarity; putative InterPro: Hypothetical hesB/yadR/yfhF family; Family membership; Belongs to the HesB/IscA family.
  
 
 0.772
nfuA
yhgI conserved hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.485
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.458
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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