STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1941Identified by match to PFAM protein family HMMPF00753; Family membership. (288 aa)    
Predicted Functional Partners:
ABO_1944
Uncharacterized protein conserved in bacteria InterPRO: Protein of unknown function (DUF442).
     0.987
ABO_1942
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
 
 0.942
sulP
Sulphate anion transporter, Sulfate transporter family, sulP: sulfate permease; conserved hypothetical protein.
 
     0.843
sulP-2
Sulfate transporter 1.1 (High-affinity sulfate transporter 1) (Hst1At) (AST101)., Sulphate anion transporter, Sulfate transporter family, TIGRFAM:sulP: sulfate permease; High confidence in function and specificity.
 
     0.783
ABO_0991
Conserved hypothetical protein.
    
 0.693
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.563
ABO_2635
(Transcriptional regulator, ArsR family, putative) identified by match to PFAM protein family HMMPF01022 InterPro: Bacterial regulatory proteins ArsR family; High confidence in function and specificity.
 
   
 0.422
ABO_2637
Hypothetical protein predicted by Glimmer/Critica.
 
     0.407
ABO_2636
Conserved hypothetical protein; Identify by sequnece similarity.
 
     0.405
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.