STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_1942Conserved hypothetical protein; Identified by sequencesimilarity; putative. (411 aa)    
Predicted Functional Partners:
ABO_1944
Uncharacterized protein conserved in bacteria InterPRO: Protein of unknown function (DUF442).
     0.983
ABO_1941
Identified by match to PFAM protein family HMMPF00753; Family membership.
 
 0.942
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.913
cysI
Sulfite reductase (NADPH); (sulphite reductase hemoprotein beta subunit) identified by sequence similarity;putative InterPro: Nitrite and sulfite reductase; High confidence in function and specificity.
   
 0.912
cysI-1
Sulfite reductase (NADPH); Identified by similarity to Pfam protein families PF01077 and PF03460 InterPro: Nitrite and sulfite reductase; High confidence in function and specificity.
   
 0.912
cysK
(cysteine synthase A, O-acetylserine sulfhydrylase A, O- acetylserine (thiol)-lyase A, sulfate starvation-induced protein 5) identified by sequencesimilarity; putative InterPro: Pyridoxal-5-phosphate-dependent enzymes beta family; High confidence in function and specificity; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.904
cysJ
NADPH-sulfite reductase; Identified by sequence similarity. InterPro: FAD-binding domain; High confidence in function and specificity.
    
 0.904
cc4
(cytochrome c4) identified by sequencesimilarity; putative InterPro: Cytochrome c class I; High confidence in function and specificity.
   
 
 0.862
sulP
Sulphate anion transporter, Sulfate transporter family, sulP: sulfate permease; conserved hypothetical protein.
 
  
 0.850
sulP-2
Sulfate transporter 1.1 (High-affinity sulfate transporter 1) (Hst1At) (AST101)., Sulphate anion transporter, Sulfate transporter family, TIGRFAM:sulP: sulfate permease; High confidence in function and specificity.
 
  
 0.790
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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