STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2067Hypothetical protein. (76 aa)    
Predicted Functional Partners:
ABO_2068
Hypothetical protein; Predicted by Glimmer/Critica.
       0.780
ABO_2069
Hypothetical protein; Predicted by Glimmer/Critica.
       0.773
ABO_2070
(potassium efflux system protein KefA putative) identified by sequence similarity; putative.
       0.675
ABO_2071
Hypothetical protein; Predicted by Glimmer/Critica.
       0.658
ABO_2072
Hypothetical protein predicted by Glimmer/Critica; Identified by sequence similarity; putative.
       0.651
ABO_2073
Hypothetical protein; Region start changed from 2358473 to 2358482 (-9 bases).
       0.636
ABO_2074
ParA family protein; Identified by sequence similarity; putative InterPro: ParA family ATPase; Family membership.
       0.442
ABO_2075
Transcriptional repressor protein, probably korB; Family membership; Belongs to the ParB family.
       0.442
ABO_2066
Hypothetical protein.
       0.436
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.