Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2263Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. (83 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase; Identified by sequence similarity; putative identified by match to PFAM potein family HMMPF00266; putative InterPro: Aminotransferase class-V; High confidence in function and specificity.
   
 0.972
ABO_1299
DsrE/DsrF-like family protein; DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction, identified by sequences imilarity InterPro: DsrE-like protein; Family membership.
 
 
 0.947
ABO_0772
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 
0.914
tusA
Conserved hypothetical protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
  
  
 
0.913
trmU-2
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Identified by sequencesimilarity; High confidence in function and specificity.
 
   
 0.900
ABO_2265
Conserved hypothetical protein; InterPro: Sulfatase.
       0.524
glnA
(glutamine synthetase type I, glutamate-ammonia ligase) identified by sequence similarity; putative identified by match to TIGRFAM protein family HMMTIGR00653; High confidence in function and specificity.
       0.519
ABO_2267
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF04093.
       0.429
ABO_2266
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.425
ABO_2268
Conserved hypothetical protein; Identified by sequence similarity; putative.
       0.425
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.