Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABO_2284Conserved hypothetical protein; Identified by Glimmer2; putative. (735 aa)    
Predicted Functional Partners:
mutY
A/G specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
  
    0.674
ABO_2286
Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
       0.583
ABO_0741
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
 
   
 0.580
hemY
hemY protein; Identified by sequence similarity; putative InterPro: TPR repeat; Hypothetical protein.
 
     0.575
ABO_2283
(sensor histidine kinase, putative) identified by match to PFAM protein family HMMPF02518 InterPro: Histidine kinase C-terminal; Family membership.
       0.559
ABO_1027
Conserved hypothetical protein.
  
     0.539
mltF
Periplasmic binding domain/transglycosylase SLTdomain fusion; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding prot [...]
  
     0.454
ABO_0568
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
  
     0.429
ABO_0764
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.427
ABO_0742
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF03561.
  
     0.426
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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