rnk protein (Alcanivorax borkumensis) - STRING interaction network

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rnk

Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity. (133 aa)

Predicted Functional Partners:

rpoC

0.588

rpoB

0.549

rpoA

0.546

rpoZ

0.531

lysA

0.485

ABO_2327

0.457

ABO_2738

0.422

Your Current Organism:

Alcanivorax borkumensis

NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABO_2327	lysA	ABO_2327	ABO_2328	Conserved hypothetical protein; Similar to putative outer membrane lipoprotein,YifL (STY3613).	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.773
ABO_2327	rnk	ABO_2327	ABO_2326	Conserved hypothetical protein; Similar to putative outer membrane lipoprotein,YifL (STY3613).	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	0.457
ABO_2738	rnk	ABO_2738	ABO_2326	(sodium/hydrogen exchanger family protein) identified by match to PFAM protein family HMMPF03471 InterPro: Na+/H+ exchanger; Family membership; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	0.422
lysA	ABO_2327	ABO_2328	ABO_2327	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Conserved hypothetical protein; Similar to putative outer membrane lipoprotein,YifL (STY3613).	0.773
lysA	rnk	ABO_2328	ABO_2326	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	0.485
rnk	ABO_2327	ABO_2326	ABO_2327	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	Conserved hypothetical protein; Similar to putative outer membrane lipoprotein,YifL (STY3613).	0.457
rnk	ABO_2738	ABO_2326	ABO_2738	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	(sodium/hydrogen exchanger family protein) identified by match to PFAM protein family HMMPF03471 InterPro: Na+/H+ exchanger; Family membership; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.422
rnk	lysA	ABO_2326	ABO_2328	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.485
rnk	rpoA	ABO_2326	ABO_0422	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.546
rnk	rpoB	ABO_2326	ABO_0378	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.549
rnk	rpoC	ABO_2326	ABO_0379	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.588
rnk	rpoZ	ABO_2326	ABO_0177	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.531
rpoA	rnk	ABO_0422	ABO_2326	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	0.546
rpoA	rpoB	ABO_0422	ABO_0378	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	ABO_0422	ABO_0379	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoZ	ABO_0422	ABO_0177	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.996
rpoB	rnk	ABO_0378	ABO_2326	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.	0.549
rpoB	rpoA	ABO_0378	ABO_0422	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	ABO_0378	ABO_0379	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	ABO_0378	ABO_0177	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993

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