Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ABO_2330(diamine acetyltransferase) (Spermidine/spermine N(1)-acetyltransferase) (SSAT) (Putrescine acetyltransferase) (Pfam: GNAT family) identified by match to TIGR protein family HMMTIGR01575 InterPro: GCN5-related N-acetyltransferase; High confidence in function and specificity. (161 aa)    
Predicted Functional Partners:
zapE
AFG1-like ATPase, putative; Reduces the stability of FtsZ polymers in the presence of ATP.
 
      0.846
rlmJ
Conserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.774
ABO_2578
Ham1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
      0.712
nhaC
Na+/H+ antiporter, putative; (rhs-related protein) identified by sequencesimilarity; putative InterPro: Na+/H+ antiporter NhaC; High confidence in function and specificity.
       0.553
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.500
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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