Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
copA-2Copper-transporting P-type ATPase (EC 3.6.3.4); High confidence in function and specificity. (836 aa)    
Predicted Functional Partners:
ABO_2355
Conserved hypothetical protein.
 
    0.913
ABO_2354
Hypothetical protein; Predicted by Glimmer/Critica.
       0.824
ABO_1360
Copper/heavy metal-translocating P-type ATPase) identified by sequencesimilarity; putative InterPro: Haloacid dehalogenase/epoxide hydrolase family; High confidence in function and specificity.
  
 
 0.810
ABO_2356
Predicted metal-binding protein (conserved hypothetical protein) identified by match to PFAM protein family HMMPF04214.
 
   
 0.805
ABO_1345
Cation-transporting P-type ATPase identified by sequence similarity; putative InterPro: E1-E2 ATPases; Hypothetical protein.
 
 
0.769
pcoA
(copper resistance protein A) identified by sequencesimilarity; putative InterPro: Multicopper oxidase type 1; High confidence in function and specificity.
 
 
 0.698
ABO_1185
Identified by match to PFAM protein family HMMPF03675 InterPro: Cytochrome c class I; Family membership.
     
 0.651
ABO_2183
Mercuric reductase, putative; (soluble pyridine nucleotide transhydrogenase) identified by sequencesimilarity; putative InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase belongs to the class-i of pyridine nucleotide- disulfide oxidoreductase family; High confidence in function and specificity.
  
  
 0.639
czcB2
Heavy metal RND efflux membrane fusion protein CzcB family identified by sequence similarity; putative; Family membership; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.638
ABO_2632
(peroxiredoxin family protein/glutaredoxin, putative); identified by sequencesimilarity; putative InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Family membership.
   
 
 0.629
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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