STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2386Identified by match to PFAM protein family HMMPF00753 InterPro: Metallo-beta-lactamase superfamily; Family membership. (213 aa)    
Predicted Functional Partners:
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 0.923
gloA-2
(lactoylglutathione lyase, methylglyoxalase, aldoketomutase, glyoxalase I, ketone-aldehyde mutase, S-D-lactoylglutathione methylglyoxal lyase) identified by sequence similarity; putative identified by match to PFAM protein family HMMPF00903 InterPro: Glyoxalase I; High confidence in function and specificity.
   
 0.923
bla
Metallo-beta-lactamase family protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.918
ABO_2387
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF03596.
       0.773
ABO_2388
Conserved hypothetical protein; Identified by sequencesimilarity; putative.
       0.538
ABO_2385
(conserved hypothetical protein; Mechanosensitive ion channel) identified by match to PFAM protein family HMMPF00924 Pfam: MS_channel.
       0.510
blaB
Identified by match to PFAM protein family HMMPF00753 InterPro: Metallo-beta-lactamase superfamily; Family membership.
  
     0.493
cpn10;
Chaperonin, 10 kDa; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
 
 0.444
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.