Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ABO_2449Hydrolase, alpha/beta fold family; Identified by match to TIGR protein family HMMTIGR01738 InterPro: Alpha/beta hydrolase fold; Family membership. (305 aa)    
Predicted Functional Partners:
ABO_0565
Serine endopeptidases; (algW) (HtrA-like protease AlgW) identified by match to PFAM protein family HMMPF00595; Function unclear.
    
 0.675
ABO_1541
Hydrolase alpha/beta fold family identified by match to TIGR protein family HMMTIGR01738 InterPro: Alpha/beta hydrolase fold; Family membership.
  
     0.566
phaB
Enoyl-CoA hydratase/isomerase; Identified by sequence similarity; putative InterPro: Enoyl-CoA hydratase/isomerase; Specificity unclear; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.524
ABO_0436
Hydrolase alpha/beta fold family identified by match to TIGR protein family HMMTIGR01738 InterPro: Alpha/beta hydrolase fold; Family membership.
  
     0.503
ABO_1079
InterPro: Serine proteases trypsin family; Family membership.
    
 
 0.495
ABO_2450
Transcriptional regulator, TetR family; Identified by sequencesimilarity. InterPro: Bacterial regulatory proteins TetR family; Family membership.
       0.494
ABO_0282
Monooxygenase flavin-binding family identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
 
   0.464
ABO_1197
Carboxylic ester hydrolases identified by sequencesimilarity; putative InterPro: Alpha/beta hydrolase fold; Family membership.
  
   
 0.461
ABO_2453
acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMMPF00441 InterPro: Acyl-CoA dehydrogenase; High confidence in function and specificity.
   
  0.436
ABO_0190
Monooxygenase, putative; (monooxygenase flavin-binding family) identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
 
   0.425
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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