STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2454(lipase/esterase family protein) identified by sequence similarity; InterPro: Esterase/lipase/thioesterase/carboxlesterase family active site; High confidence in function and specificity. (296 aa)    
Predicted Functional Partners:
estC
InterPro: Carboxylesterases type-B; High confidence in function and specificity.
 
   
 0.607
ABO_2107
(monooxygenase, putative) identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); High confidence in function and specificity.
    0.577
ABO_1784
Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership.
   
 
 0.542
ABO_2455
Conserved hypothetical protein; (InterPro: contains Esterase/lipase/thioesterase family active site, PS50187).
     
 0.514
ABO_2453
acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMMPF00441 InterPro: Acyl-CoA dehydrogenase; High confidence in function and specificity.
       0.507
ABO_1197
Carboxylic ester hydrolases identified by sequencesimilarity; putative InterPro: Alpha/beta hydrolase fold; Family membership.
      
 0.482
ABO_1097
Monooxygenase, flavin-binding family; Identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
    0.481
ABO_2393
Monooxygenase, flavin-binding family; Identified by sequence similarity; putative InterPro: Flavin-containing monooxygenase (FMO); Family membership.
    0.471
ABO_1244
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF01118.
  
   0.423
estA
(lipase/esterase family protein) identified by sequence similarity; putative InterPro: Esterase/lipase/thioesterase/carboxlesterase family active site; High confidence in function and specificity.
  
   
0.418
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.