STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2455Conserved hypothetical protein; (InterPro: contains Esterase/lipase/thioesterase family active site, PS50187). (407 aa)    
Predicted Functional Partners:
ABO_2546
(fatty acid desaturase, putative) identified by sequencesimilarity; putative InterPro: Fatty acid desaturase type 2; High confidence in function and specificity.
  
     0.716
ABO_1410
Acyltransferase, putative; (Acyltransferase family protein) identified by sequencesimilarity; putative InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf); Family membership.
  
     0.696
ABO_2480
Conserved hypothetical protein.
  
     0.630
ABO_1096
Conserved hypothetical protein; Identified by sequence similarity.
  
     0.621
ABO_2693
Conserved hypothetical protein.
  
     0.609
ABO_2562
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.601
p450-3
(cytochrome P450, putative) identified by sequencesimilarity; putative InterPro: Cytochrome P450 enzyme; High confidence in function and specificity.
  
     0.590
ABO_0188
Predicted metal-dependent hydrolase; conserved hypothetical protein.
  
     0.584
ABO_0809
Conserved hypothetical protein; Identified by sequence similarity; putative.
 
   
 0.581
ABO_0197
Metal-dependent hydrolase, putative; Predicted metal-dependent hydrolase; conserved hypothetical protein.
  
     0.564
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.