ABO_2456 protein (Alcanivorax borkumensis) - STRING interaction network

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Score

ABO_2456

Conserved hypothetical protein; Identified by sequence similarity; putative. (211 aa)

Predicted Functional Partners:

greB

0.701

ABO_2458

0.661

hemB

0.498

ABO_1229

0.428

Your Current Organism:

Alcanivorax borkumensis

NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABO_1229	ABO_2456	ABO_1229	ABO_2456	Hypothetical protein predicted by Glimmer/Critica.	Conserved hypothetical protein; Identified by sequence similarity; putative.	0.428
ABO_2456	ABO_1229	ABO_2456	ABO_1229	Conserved hypothetical protein; Identified by sequence similarity; putative.	Hypothetical protein predicted by Glimmer/Critica.	0.428
ABO_2456	ABO_2458	ABO_2456	ABO_2458	Conserved hypothetical protein; Identified by sequence similarity; putative.	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	0.661
ABO_2456	greB	ABO_2456	ABO_2457	Conserved hypothetical protein; Identified by sequence similarity; putative.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.701
ABO_2456	hemB	ABO_2456	ABO_2459	Conserved hypothetical protein; Identified by sequence similarity; putative.	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	0.498
ABO_2458	ABO_2456	ABO_2458	ABO_2456	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	Conserved hypothetical protein; Identified by sequence similarity; putative.	0.661
ABO_2458	greB	ABO_2458	ABO_2457	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.780
ABO_2458	hemB	ABO_2458	ABO_2459	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	0.516
greB	ABO_2456	ABO_2457	ABO_2456	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	Conserved hypothetical protein; Identified by sequence similarity; putative.	0.701
greB	ABO_2458	ABO_2457	ABO_2458	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	0.780
greB	hemB	ABO_2457	ABO_2459	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	0.587
hemB	ABO_2456	ABO_2459	ABO_2456	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	Conserved hypothetical protein; Identified by sequence similarity; putative.	0.498
hemB	ABO_2458	ABO_2459	ABO_2458	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	Ring-cleaving dioxygenase, putative; Identified by sequencesimilarity; putative InterPro: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Family membership.	0.516
hemB	greB	ABO_2459	ABO_2457	Porphobilinogen synthase identified by sequence similarity; putative InterPro: Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.587