STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pfeAOuter membrane ferric enterobactin receptor; Identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity. (757 aa)    
Predicted Functional Partners:
tonB2
Ferric siderophore transport system,periplasmicbinding prot; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.854
fpvB
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; Family membership.
 
  
 0.685
ABO_1694
Conserved hypothetical protein.
 
     0.676
fhuE
Outer membrane ferric siderophore receptor identified by sequencesimilarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
  
  
 0.648
ABO_1693
Conserved hypothetical protein.
 
     0.641
ABO_1692
Uncharacterized protein conserved in bacteria (COG 3295).
 
     0.611
fpvA
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative Interpro:; Family membership.
 
  
 0.591
ABO_1784
Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership.
  
  
 0.534
ABO_1526
Conserved hypothetical protein.
  
 
 
 0.477
ABO_1575
Conserved hypothetical protein.
  
 
 
 0.468
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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