STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2516Hypothetical protein; (cadA-1) (cadmium translocating P-type ATPase) identified by sequence similarity; putative. (514 aa)    
Predicted Functional Partners:
ABO_2517
Two-component sensor protein; Identified by sequencesimilarity; putative InterPro: Histidine kinase C-terminal; Family membership.
       0.552
ftsK
Cell division protein FtsK; Identified by sequence similarity; putative InterPro: FtsK/SpoIIIE family This domain contains a putative ATP binding P-loop motif. It is found in the FtsK cell division protein from E. coli FTSK_ECOLI and the stage III sporulation protein E SpoIIIE; Family membership.
    
 
 0.509
ABO_1307
Sensor histidine kinase/respose regulator, contains HisKA, HATPase_c and two Response_reg receiver domains; identified by sequencesimilarity; putative InterPro: Histidine kinase C-terminal; Family membership.
  
 
 
 0.506
ABO_1784
Non-ribosomal peptide synthase fragment, contains condensation, fatty-acid-CoA ligase and thioesterase domains. identified by sequence similarity; putative InterPro: AMP-dependent synthetase and ligase; Family membership.
  
 
 0.462
ABO_1332
(tail-specific protease prc) identified by sequence similarity; putative InterPro: Carboxyl-terminal protease; High confidence in function and specificity; Belongs to the peptidase S41A family.
  
   0.418
ABO_0628
InterPro: TonB-dependent receptor protein; Family membership.
    
 
 0.410
pfeA
Outer membrane ferric enterobactin receptor; Identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
    
 
 0.410
fklB-1
(fklB-2) (peptidyl-prolyl cis-trans isomerase FKBP-type) identified by sequencesimilarity; putative InterPro: Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; Function unclear.
  
 
 
 0.402
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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