STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2542Conserved hypothetical protein. (364 aa)    
Predicted Functional Partners:
phoR-2
Sensory box histidine kinase PhoR; Identified by sequence similarity; putative InterPro: Histidine kinase C-terminal; Specificity unclear.
 
     0.952
phoP-2
DNA-binding heavy metal response regulator, putative; Identified by match to TIGR protein family HMMTIGR01387 InterPro: Response regulator receiver domain; Specificity unclear.
 
     0.852
ABO_1549
Conserved hypothetical protein.
  
     0.516
ABO_2544
(small multidrug resistance protein, putative) identified by match to PFAM protein family HMMPF00893 InterPro: Integral membrane protein DUF7; Family membership.
       0.499
ABO_1552
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF01882 InterPro: Protein of unknown function DUF58.
  
     0.431
ABO_2539
(Cytochrome c5, putative) identified by sequencesimilarity; putative; Family membership.
       0.429
ABO_2540
Cytochrome c5, putative; (cytochrome c5) identified by sequence similarity; putative InterPro: Cytochrome c class I a monoheme c-type cytochrome. it is unreactive with cytochrome c reductase or oxidase; High confidence in function and specificity.
       0.429
ABO_1550
Conserved hypothetical protein.
  
     0.407
ABO_1547
Conserved hypothetical protein.
  
     0.403
ABO_1548
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.