STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2547Membrane protein, putative; Identified by match to PFAM protein family HMMPF03977 shows similarity to uncharacterized iron-regulated membrane protein (DUF337).This is a family of uncharacterized iron-regulated membrane proteins; Function unclear. (534 aa)    
Predicted Functional Partners:
ABO_2548
Hypothetical protein; Predicted by Glimmer/Critica.
       0.824
fpvA
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative Interpro:; Family membership.
 
  
 0.702
fpvB
Ferripyoverdine receptor precursor; Identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; Family membership.
 
  
 0.686
ABO_0073
Conserved hypothetical protein; Region start changed from 77784 to 77655 (-129 bases) regional start was changed to be in accordance with the results of the observations.
  
     0.649
fhuE
Outer membrane ferric siderophore receptor identified by sequencesimilarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
 
  
 0.635
ABO_2549
Hypothetical protein; Predicted by Glimmer/Critica.
       0.629
ABO_2550
Hypothetical protein; Predicted by Glimmer/Critica.
       0.629
foxA
(ferrioxamine receptor putative) identified by sequence similarity; putative InterPro: TonB-dependent receptor protein; High confidence in function and specificity.
 
  
 0.575
ABO_2138
TonB-dependent receptor; Identified by match to PFAM protein family HMMPF00593; Specificity unclear.
 
  
 0.488
fhuA
Ferrichrome-iron receptor precursor (Ferric hydroxamate uptake) (Ferric hydroxamate receptor)., TonB-dependent siderophore receptor, TonB-dependent Receptor Plug Domain, TonB-siderophor: TonB-dependent siderophore receptor; High confidence in function and specificity.
 
  
 0.438
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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