STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABO_2602Hypothetical protein. (70 aa)    
Predicted Functional Partners:
ABO_2603
Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
    0.837
ABO_2601
Conserved hypothetical protein; Identified by sequencesimilarity; putative; Belongs to the UPF0149 family.
  
    0.571
ABO_1260
Conserved hypothetical protein.
  
     0.538
ABO_1835
Transcriptional regulator, putative; (conserved hypothetical protein) identified by match to PFAM protein family HMMPF00376 InterPro: Bacterial regulatory proteins MerR family.
  
    0.519
pepP
(aminopeptidase P II, xaa-pro aminopeptidase, x-pro aminopeptidase, aminoacylproline aminopeptidase) identified by sequence similarity; putative InterPro: metallopeptidase family M24; High confidence in function and specificity; Belongs to the peptidase M24B family.
 
     0.493
ABO_0775
Glycine cleavage system transcriptional repressor, putative; Identified by sequence similarity; putative InterPro: ACT domain; Function unclear.
  
     0.458
ABO_2604
5-formyltetrahydrofolate cyclo-ligase family protein identified by match to PFAM protein family HMMPF01812 InterPro: 5-formyltetrahydrofolate cyclo-ligase; Family membership.
       0.448
cheW
(chemotaxis protein, putative), pfam01584, CheW, CheW-like domain; conserved hypothetical protein.
  
     0.413
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.