STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pilTType IV pili twitching motility protein PilT; Identified by sequence similarity InterPro: Bacterial type II secretion system protein E; Function unclear. (344 aa)    
Predicted Functional Partners:
pilD
Leaderpeptidase and N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.873
tapC
Type IV pilus assembly protein TapC; Identified by sequence similarity; Family membership.
 
  
 0.829
pilM
Type IV fimbrial biogenesis protein PilM.
 
   
 0.820
gspF
Involved in a general secretion pathway (GSP) for the export of proteins. Belongs to the GSP F family,identified by sequence similarity. InterPro: Bacterial type II secretion system protein; Family membership.
 
  
 0.814
pilU
Type IV pili twitching motility protein PilT; Identified by sequence similarity InterPro: Bacterial type II secretion system protein E; Function unclear.
 
  
0.803
pilQ
Fimbrial assembly protein pilQ precursor; InterPro: General (type II) secretion pathway (GSP) D protein; Hypothetical protein.
 
   
 0.745
pilO
Type 4 fimbrial biogenesis protein pilO.
 
  
 0.694
pilN-2
Type IV pili biogenesis protein PilN.
 
  
 0.657
rec2
(DNA internalization-related competence protein ComEC/Rec2) identified by match to PFAM protein family HMMPF03772 InterPro: DNA internalization-related competence protein ComEC/Rec2 Possibly exported; Family membership.
 
   
 0.641
ABO_2669
Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
     
 0.613
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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