STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2697Hypothetical protein. (280 aa)    
Predicted Functional Partners:
ABO_2696
(oxidoreductase, putative) identified by sequence similarity; putative InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily; High confidence in function and specificity.
 
   
 0.856
ABO_1096
Conserved hypothetical protein; Identified by sequence similarity.
  
     0.763
ABO_2693
Conserved hypothetical protein.
  
     0.763
ABO_2480
Conserved hypothetical protein.
  
     0.751
ABO_0197
Metal-dependent hydrolase, putative; Predicted metal-dependent hydrolase; conserved hypothetical protein.
  
     0.741
ABO_1996
Hypothetical protein.
  
     0.739
ABO_2562
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.735
ABO_0961
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.734
ABO_0181
Conserved hypothetical protein; Predicted metal-dependent hydrolase.
  
     0.733
ABO_0188
Predicted metal-dependent hydrolase; conserved hypothetical protein.
  
     0.729
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.