STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2738(sodium/hydrogen exchanger family protein) identified by match to PFAM protein family HMMPF03471 InterPro: Na+/H+ exchanger; Family membership; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (566 aa)    
Predicted Functional Partners:
mnhAB
Multisubunit Na+/H+ antiporter; Probable Na(+)/H(+) antiporter subunit A/B, NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone/plastoquinone (complex I), various chains,2a6301s01: monovalent cation:proton antiporter; High confidence in function and specificity.
      
 0.490
ABO_0929
Transporter sodium/sulfate symporter family, identified by match to PFAM protein family HMMPF03600, TMHMM: reporting 12 transmembrane helices; Family membership.
 
   
 0.471
gidB
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
       0.441
gidA
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.441
trkA
(potassium uptake protein TrkA) identified by match to PFAM protein family HMMPF02080 InterPro: KTN NAD-binding domain; Family membership.
     
 0.430
trkH
Potassium uptake protein, TrkH family; Identified by match to PFAM protein family HMMPF03631 InterPro: Cation transport protein; Family membership.
     
 0.425
rnk
Nucleoside diphosphate kinase regulator; Identified by sequence similarity;putative; High confidence in function and specificity.
  
   
 0.422
rnfA
Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
      
 0.418
mnhE
(Multisubunit Na+/H+ antiporter, MnhE subunit, putative) identifiedby sequence similarity; putative InterPro: Protein of unknown function DUF68; Family membership.
      
 0.418
ABO_2739
(acyl-CoA dehydrogenase family protein; putative) identified by match to PFAM protein family HMMPF00441; Family membership.
       0.413
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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