STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABO_2743Conserved hypothetical protein; Identified by sequence similarity; putative InterPro: conserved hypothetical protein (UPF0010_DUF); Belongs to the glucose-6-phosphate 1-epimerase family. (298 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Identified by sequencesimilarity; putative InterPro: Phosphoglucose isomerase (PGI); High confidence in function and specificity.
  
 
 0.907
pgm
Phosphoglucomutase/phosphomannomutase; Identified by sequence similarity; putative InterPro: Phosphoglucomutase and phosphomannomutase family; High confidence in function and specificity.
    
  0.901
algC
Phosphomannomutase; Identified by sequence similarity; putative InterPro: Phosphoglucomutase and phosphomannomutase family; High confidence in function and specificity.
    
  0.901
ilvD2
Dihydroxy-acid dehydratase; (ilvD-2) identified by sequence similarity; putative identified by match to PFAM protein family HMMPF00920 InterPro: Dihydroxy-acid dehydratase; High confidence in function and specificity; Belongs to the IlvD/Edd family.
 
    0.824
tktA
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.807
talB
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
   
 
  0.801
fda
Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
     
  0.800
ABO_2700
Conserved hypothetical protein; Identified by match to PFAM protein family HMMPF04076.
    
   0.750
ABO_0270
Glycosidases; Murein hydrolase B (hydrolysing O- and S-glycosyl compounds) identified by match to PFAM protein family HMMPF01471 InterPro: Putative peptidoglycan binding domain 1; Specificity unclear.
 
      0.646
atfA1
Acyltransferase, homologous to ABO_1804, AtfA2 and to the ACIAD0832, wax ester synthase/ diacylglycerol acyltransferase of Acinetobacter sp. AP1; High confidence in function and specificity.
       0.598
Your Current Organism:
Alcanivorax borkumensis
NCBI taxonomy Id: 393595
Other names: A. borkumensis SK2, Alcanivorax borkumensis SK2, Alcanivorax borkumensis str. SK2, Alcanivorax borkumensis strain SK2
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