STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (76 aa)    
Predicted Functional Partners:
SDK43988.1
[Acyl-carrier-protein] S-malonyltransferase.
 
 0.990
SDK83734.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.974
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.961
SDK44138.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.960
rpmF
LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.
  
 
 0.949
SDK81545.1
Uncharacterized conserved protein, DUF362 family.
   
 0.945
SDL23641.1
4Fe-4S binding domain-containing protein.
   
 0.945
SDL31280.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
   
 0.945
SDJ96329.1
NADP-reducing hydrogenase subunit HndA.
   
  0.936
SDL33853.1
Hypothetical protein.
   
  0.936
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.