STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK14841.1AhpC/TSA family protein. (90 aa)    
Predicted Functional Partners:
SDK14750.1
Cytochrome c-type biogenesis protein.
 
  
 0.830
SDK14787.1
AhpC/TSA family protein.
       0.718
SDK04814.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.709
SDK72227.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
    0.509
SDK83734.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
       0.439
SDJ81682.1
AhpC/TSA family protein.
 
     0.407
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.