STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK91394.1ArsR family transcriptional regulator. (120 aa)    
Predicted Functional Partners:
SDK91431.1
Predicted Fe-Mo cluster-binding protein, NifX family.
     0.983
SDL06754.1
Transcriptional regulator, ArsR family.
  
   
 0.779
SDK91518.1
Predicted permease.
  
  
 0.545
SDK83734.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.523
SDK91477.1
Hypothetical protein.
  
  
 0.522
SDL28513.1
Cu+-exporting ATPase.
  
  
 0.503
SDK91364.1
Hypothetical protein.
  
    0.465
SDK18516.1
Putative efflux protein, MATE family.
  
     0.457
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.423
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.