STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK91866.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
SDK91903.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
   0.905
SDK83734.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.853
SDK76689.1
acetyl-CoA decarbonylase/synthase delta subunit.
   
 0.847
SDK76721.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
   
 0.847
SDK76580.1
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
 
 0.784
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.732
SDK04814.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.708
SDL23641.1
4Fe-4S binding domain-containing protein.
    
 0.662
SDK91940.1
Hypothetical protein.
       0.554
SDK84545.1
Homoserine dehydrogenase.
  
 
 0.521
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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