STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK94185.1Protein of unknown function. (424 aa)    
Predicted Functional Partners:
SDK94104.1
Succinyl-CoA synthetase, alpha subunit.
     0.986
SDK83734.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.971
SDK76008.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.965
SDK94067.1
Protein of unknown function.
 
   0.883
SDK94144.1
FdrA protein.
 
     0.876
SDK93089.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.800
SDK94020.1
Purine catabolism regulatory protein.
 
     0.796
SDK82804.1
Glycine/D-amino acid oxidase.
  
 0.788
SDK94376.1
Cyanuric acid amidohydrolase; Cyclic amide hydrolase of unknown substrate specificity. Catalyzes the hydrolytic ring-opening of a cyclic amide. Does not act on cyanuric acid nor barbituric acid.
 
     0.788
SDJ98726.1
Urocanate reductase.
  
 0.756
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.