STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK96225.1Hypothetical protein. (726 aa)    
Predicted Functional Partners:
SDK96269.1
Polysaccharide pyruvyl transferase CsaB.
 
    0.841
SDK96306.1
N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
     0.777
SDK96189.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
 
     0.677
SDK96341.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains.
       0.669
SDL13962.1
YycH protein.
  
     0.627
SDK96388.1
Transketolase subunit A.
       0.611
SDL27729.1
Ribonucleoside-diphosphate reductase alpha chain.
  
     0.593
SDK96426.1
Transketolase.
       0.588
SDL13915.1
YycH protein.
  
     0.586
SDK96155.1
Hypothetical protein.
       0.544
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.