STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL01233.1Copper amine oxidase N-terminal domain-containing protein. (363 aa)    
Predicted Functional Partners:
SDK17070.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.900
SDJ84291.1
S-layer homology domain-containing protein.
  
  
  0.820
SDJ84513.1
S-layer homology domain-containing protein.
  
     0.770
SDJ90242.1
Carbohydrate binding domain-containing protein.
  
     0.764
SDK96155.1
Hypothetical protein.
  
     0.764
SDK11901.1
Ig-like domain (group 2).
  
     0.761
SDK96269.1
Polysaccharide pyruvyl transferase CsaB.
  
     0.761
SDJ94769.1
S-layer homology domain-containing protein.
  
     0.741
SDK51974.1
S-layer homology domain-containing protein.
  
     0.732
SDK96496.1
Predicted protein.
  
     0.729
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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