Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDJ84378.1 | SDL06389.1 | SAMN05660472_00090 | SAMN05660472_02547 | Outer membrane efflux protein. | Putative peptidoglycan binding domain-containing protein. | 0.573 |
| SDK04664.1 | SDK85798.1 | SAMN05660472_00606 | SAMN05660472_02144 | Putative peptidoglycan binding domain-containing protein. | SpoIID/LytB domain protein. | 0.492 |
| SDK04664.1 | SDL06389.1 | SAMN05660472_00606 | SAMN05660472_02547 | Putative peptidoglycan binding domain-containing protein. | Putative peptidoglycan binding domain-containing protein. | 0.646 |
| SDK15379.1 | SDK40899.1 | SAMN05660472_00887 | SAMN05660472_01223 | Germination protein YpeB. | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.744 |
| SDK15379.1 | SDK86030.1 | SAMN05660472_00887 | SAMN05660472_02150 | Germination protein YpeB. | LysM domain-containing protein. | 0.478 |
| SDK15379.1 | SDK86311.1 | SAMN05660472_00887 | SAMN05660472_02156 | Germination protein YpeB. | Germination protein, Ger(x)C family. | 0.795 |
| SDK15379.1 | SDK86357.1 | SAMN05660472_00887 | SAMN05660472_02157 | Germination protein YpeB. | Spore germination protein. | 0.750 |
| SDK15379.1 | SDL04396.1 | SAMN05660472_00887 | SAMN05660472_02493 | Germination protein YpeB. | L,D-transpeptidase catalytic domain. | 0.572 |
| SDK15379.1 | SDL05902.1 | SAMN05660472_00887 | SAMN05660472_02533 | Germination protein YpeB. | L,D-transpeptidase catalytic domain. | 0.579 |
| SDK15379.1 | SDL06389.1 | SAMN05660472_00887 | SAMN05660472_02547 | Germination protein YpeB. | Putative peptidoglycan binding domain-containing protein. | 0.619 |
| SDK40899.1 | SDK15379.1 | SAMN05660472_01223 | SAMN05660472_00887 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Germination protein YpeB. | 0.744 |
| SDK40899.1 | SDK85798.1 | SAMN05660472_01223 | SAMN05660472_02144 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | SpoIID/LytB domain protein. | 0.548 |
| SDK40899.1 | SDK86030.1 | SAMN05660472_01223 | SAMN05660472_02150 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | LysM domain-containing protein. | 0.782 |
| SDK40899.1 | SDK86311.1 | SAMN05660472_01223 | SAMN05660472_02156 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Germination protein, Ger(x)C family. | 0.727 |
| SDK40899.1 | SDK86357.1 | SAMN05660472_01223 | SAMN05660472_02157 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein. | 0.708 |
| SDK40899.1 | SDL04396.1 | SAMN05660472_01223 | SAMN05660472_02493 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | L,D-transpeptidase catalytic domain. | 0.545 |
| SDK40899.1 | SDL05902.1 | SAMN05660472_01223 | SAMN05660472_02533 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | L,D-transpeptidase catalytic domain. | 0.548 |
| SDK40899.1 | SDL06389.1 | SAMN05660472_01223 | SAMN05660472_02547 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative peptidoglycan binding domain-containing protein. | 0.594 |
| SDK85798.1 | SDK04664.1 | SAMN05660472_02144 | SAMN05660472_00606 | SpoIID/LytB domain protein. | Putative peptidoglycan binding domain-containing protein. | 0.492 |
| SDK85798.1 | SDK40899.1 | SAMN05660472_02144 | SAMN05660472_01223 | SpoIID/LytB domain protein. | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.548 |
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