STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL24314.1Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein. (536 aa)    
Predicted Functional Partners:
SDL24389.1
Phage portal protein, SPP1 family.
 
     0.920
SDL24502.1
P22 coat protein-gene protein 5.
 
     0.832
SDL24282.1
Hypothetical protein.
       0.773
SDL24248.1
Protein of unknown function.
       0.705
SDL24424.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.682
SDL24202.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.617
SDL24357.1
Hypothetical protein.
       0.610
SDL24463.1
Protein of unknown function.
       0.522
SDL24055.1
DNA modification methylase.
 
    0.471
SDK72227.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
     0.402
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.