STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
InlJ_2Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1001 aa)    
Predicted Functional Partners:
SpoIIIE
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.656
HQ45_06080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.621
InlA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.610
HQ45_06955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
LuxQ
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.592
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.588
HQ45_00940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
HQ45_07060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.572
HQ45_00505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.545
EvgS
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.538
Your Current Organism:
Porphyromonas crevioricanis
NCBI taxonomy Id: 393921
Other names: ATCC 55563, CCUG 47702 [[Porphyromonas cansulci]], JCM 13913 [[Porphyromonas cansulci]], JCM 15906, NCTC 12858 [[Porphyromonas cansulci]], NUM 402, P. crevioricanis, Porphyromonas cansulci, VPB 4875 [[Porphyromonas cansulci]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.