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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
ACP23842.1Putative peptidase M22, glycoprotease. (220 aa)    
Predicted Functional Partners:
ACP27116.1
Putatuive aminoglycoside phosphotransferase.
  
 
 0.980
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.943
birA
Biotin transcriptional regulator bifunctional protein.
  
    0.714
ACP23843.1
Predicted ribosomal-protein-alanine N-acetyltransferase.
  
 
 0.691
ACP23841.1
Putative scaffold protein Nfu/NifU.
     
 0.579
tadA
Putative cytidine and deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.542
ACP24585.1
DNA polymerase.
  
    0.541
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
   
 0.538
ACP23848.1
Putative hemolysin-related protein.
 
    0.528
phoH
Phosphate starvation inducible family protein PhoH.
 
     0.519
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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