STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP23851.1Putative transcriptional regulator. (136 aa)    
Predicted Functional Partners:
ACP26096.1
Putative transmembrane protein.
  
   
 0.678
ACP26046.1
Putative two-component sensor histidine kinase.
  
     0.675
ACP26097.1
Putative transmembrane protein.
  
     0.648
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.635
ACP26446.1
Putative transmembrane protein.
  
     0.605
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
 
   
 0.598
ACP27064.1
Conserved hypothetical protein.
  
     0.588
HolA
DNA polymerase III, delta subunit protein.
  
     0.575
ACP26095.1
Hypothetical protein.
  
     0.557
ACP24695.1
DNA polymerase III, chi subunit protein.
  
     0.556
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.