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NGR_c00560 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c00560" - annotation not available in Sinorhizobium fredii NGR234
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c00560annotation not available (184 aa)    
Predicted Functional Partners:
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates (389 aa)
   
  0.937
NGR_c29320
annotation not available (232 aa)
 
        0.763
NGR_c00570
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (174 aa)
         
  0.651
NGR_c36450
annotation not available (116 aa)
       
  0.566
NGR_c00550
annotation not available (402 aa)
              0.538
NGR_c23800
annotation not available (372 aa)
 
 
  0.504
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (299 aa)
   
        0.453
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus (311 aa)
   
        0.406
NGR_c27940
annotation not available (332 aa)
   
 
  0.401
NGR_a01140
Uncharacterized protein y4vJ; y4vJ; NGR234_412; Belongs to the bacterial luciferase oxidoreductase family (351 aa)
   
 
  0.401
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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