Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP23890.1Hypothetical protein contains SNARE associated Golgi protein region. (265 aa)    
Predicted Functional Partners:
ACP23891.1
Predicted mercuric reductase.
   
 0.991
ACP25069.1
Dihydrolipoyl dehydrogenase.
    
 0.779
lpdA1
Dihydrolipoamide dehydrogenase.
    
 0.767
lpdA2
Dihydrolipoamide dehydrogenase.
    
 0.758
ACP23892.1
Two component sensor histidine kinase protein.
       0.736
ACP27149.1
Conserved hypothetical protein contains extracellular solute-binding domain.
 
  
 0.706
ACP23957.1
Predicted CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.660
ACP27148.1
Binding-protein-dependent transport systems inner membrane component.
 
   
 0.633
ACP25464.1
Glutathione reductase; Maintains high levels of reduced glutathione.
    
 0.539
ACP25173.1
Pyridine nucleotide-disulphide oxidoreductasedimerisation region.
    
 0.508
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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