Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP23914.1Putative ribose transport system, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (361 aa)    
Predicted Functional Partners:
ACP23915.1
Predicted sugar ABC transporter, ATP binding protein.
 
 0.996
ACP23913.1
Periplasmic binding protein/LacI transcriptionalregulator.
 
 0.990
FrcK
Conserved hypothetical protein contains uridine kinase related domain.
 
     0.868
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
 
 
 0.846
ACP24445.1
Putative solute-binding component of ABC transporter.
 
 
 0.830
ACP25502.1
Putative ribose transport system, substrate-binding protein.
 
 
 0.826
ACP27098.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.816
ACP23912.1
Putative ROK family protein.
 
  
 0.734
ACP25501.1
Putative ribose transport system, substrate-binding protein.
 
 
 0.710
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.697
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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