STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP23914.1Putative ribose transport system, inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (361 aa)    
Predicted Functional Partners:
ACP23915.1
Predicted sugar ABC transporter, ATP binding protein.
 0.994
ACP23913.1
Periplasmic binding protein/LacI transcriptionalregulator.
 
 0.984
FrcK
Conserved hypothetical protein contains uridine kinase related domain.
 
     0.850
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
 
 0.836
ACP24445.1
Putative solute-binding component of ABC transporter.
 
 0.820
ACP25502.1
Putative ribose transport system, substrate-binding protein.
 
 0.815
ACP27098.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.805
ACP23912.1
Putative ROK family protein.
 
    0.725
ACP25501.1
Putative ribose transport system, substrate-binding protein.
 
 0.694
rbsA2
Ribose import ATP-binding protein RbsA1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.680
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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