STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP23924.1Putative CDP-alcohol phosphatidyltransferase. (221 aa)    
Predicted Functional Partners:
ACP23926.1
Predicted phosphatidate cytidylyltransferase.
 
  
 0.985
ACP23925.1
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
 
 0.963
ACP23923.1
Osmosensitive K+ channel signal transduction histidine kinase.
     
 0.563
ACP24009.1
Beta-ketoacyl synthase.
 
 
 0.543
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
   
 0.538
ACP23922.1
Predicted transmembrane protein.
 
     0.473
folD2
Bifunctional protein FolD2; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.463
ACP25250.1
Putative molybdenum cofactor biosynthesis protein.
  
  
 0.446
ACP25646.1
Hypothetical protein.
  
     0.440
ACP24929.1
Hypothetical protein.
  
     0.437
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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