Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
phoBPhosphate regulon transcriptional regulatory protein PhoB. (227 aa)    
Predicted Functional Partners:
phoR
Two component sensor histidine kinase protein, phosphate regulon sensor PhoR.
 
 0.993
ACP26773.1
Sensor protein.
 
 
 0.847
ACP24133.1
Predicted sensor histidine kinase protein with ATP-binding domain.
 
 
 0.823
phoU
Phosphate transport system protein PhoU; Plays a role in the regulation of phosphate uptake.
 
  
 0.804
ACP24580.1
Two component sensor kinase.
 
 
 0.783
ACP24554.1
Two component sensor kinase.
 
 
 0.760
ACP27117.1
Sensory transduction histidine kinase.
 
 
 0.760
ACP23985.1
Predicted two-component sensor histidine kinase.
 
 
 0.735
ACP25415.1
Two component sensor kinase.
 
 
 0.732
ACP27345.1
Putative sensory transduction histidine kinase.
 
 
 0.724
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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