Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP23960.1Predicted extracellular amino acid solute-binding protein. (283 aa)    
Predicted Functional Partners:
ACP26763.1
Putative amino acid ABC transporter, permease protein.
 
 
 0.805
ACP26292.1
Putative transmembrane component of ABC transporter.
 
 
 0.804
ACP27014.1
Putative amino acid ABC transporter, permease protein.
 
 
 0.802
ACP26764.1
Putative permease component of ABC transporter protein.
 
 
 0.801
ACP26291.1
Putative transmembrane component of ABC transporter.
 
 
 0.798
ACP25483.1
Predicted amino acid ABC transporter, permease protein.
 
 
 0.791
ACP23994.1
Putative amino acid ABC transporter, inner membrane component.
 
 
 0.778
ACP26952.1
Putative amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.778
ACP25484.1
Amino acid ABC transporter, permease protein.
 
  
 0.773
ACP23993.1
Putative amino acid ABC transporter, inner membrane component.
 
  
 0.756
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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