STRINGSTRING
NGR_c01620 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c01620" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c01620annotation not available (269 aa)    
Predicted Functional Partners:
NGR_c01630
annotation not available (217 aa)
              0.872
NGR_c01610
annotation not available (136 aa)
 
          0.868
NGR_c03320
annotation not available (641 aa)
   
          0.742
NGR_c22820
annotation not available (136 aa)
   
          0.717
NGR_c07660
annotation not available (94 aa)
   
          0.702
NGR_c09250
annotation not available (147 aa)
   
          0.701
NGR_c24610
annotation not available (120 aa)
   
          0.695
NGR_c16970
annotation not available (324 aa)
   
          0.688
motD
annotation not available (493 aa)
   
          0.687
NGR_c05640
annotation not available (129 aa)
   
          0.677
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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