STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP23984.1Predicted two-component transcriptional regulator, LuxR family. (215 aa)    
Predicted Functional Partners:
ACP23985.1
Predicted two-component sensor histidine kinase.
 
 
 0.872
ACP26745.1
Putative transcriptional regulator, LuxR family.
  
     0.614
ACP26710.1
Sensory box/GGDEF family protein.
 
 
 0.536
ACP23983.1
Hypothetical protein.
       0.517
ACP26220.1
Putative sensor histidine kinase (HWE) with PAS and response regulator receiver domains.
  
 
 0.512
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 
   0.493
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
  
 
 0.473
ACP26186.1
Adenylate/guanylate cyclase.
  
 
 0.430
ACP26605.1
Putative response regulator/GGDEF domain transcriptional regulator.
 
 
 0.424
ACP25415.1
Two component sensor kinase.
  
 
 0.404
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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