Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ACP23996.1Amino acid ABC transporter, ATP-binding protein. (257 aa)    
Predicted Functional Partners:
ACP23994.1
Putative amino acid ABC transporter, inner membrane component.
 
 
 0.992
ACP23993.1
Putative amino acid ABC transporter, inner membrane component.
 
 
 0.991
ACP23995.1
Putative ABC transporter, periplasmic amino acid-binding protein.
 
  
 0.922
ACP25483.1
Predicted amino acid ABC transporter, permease protein.
 
  
 0.884
ACP25484.1
Amino acid ABC transporter, permease protein.
 
  
 0.883
ACP27014.1
Putative amino acid ABC transporter, permease protein.
    0.871
ACP26199.1
Dipeptide ABC transporter, ATP-binding protein.
 
     
0.867
ACP25482.1
Putative solute-binding component of ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.781
ACP26763.1
Putative amino acid ABC transporter, permease protein.
 
    0.775
ACP26291.1
Putative transmembrane component of ABC transporter.
    0.774
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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