STRINGSTRING
NGR_c01980 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c01980" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c01980annotation not available (396 aa)    
Predicted Functional Partners:
NGR_c01990
annotation not available (537 aa)
 
   
  0.931
lysC
annotation not available (424 aa)
   
  0.917
NGR_c31300
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (321 aa)
   
 
  0.914
arcA1
annotation not available (307 aa)
     
 
  0.907
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (532 aa)
         
  0.903
mdh
annotation not available (358 aa)
         
    0.900
NGR_c20350
annotation not available (381 aa)
         
    0.900
NGR_c01970
annotation not available (302 aa)
 
          0.866
argH
annotation not available (467 aa)
   
 
  0.827
arcA2
annotation not available (418 aa)
       
  0.806
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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