STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24007.1Follicular variant translocation protein 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (267 aa)    
Predicted Functional Partners:
ACP24009.1
Beta-ketoacyl synthase.
 
 
 0.799
ACP26757.1
NAD dependent epimerase/dehydratase family protein.
  
 
   0.717
ACP24006.1
Conserved hypothetical protein, contains sulfatase protein domain.
 
     0.707
ACP26827.1
Putative short-chain dehydrogenase.
  
 
   0.696
ACP27042.1
3-oxoacyl-(acyl-carrier protein) reductase.
  
 
   0.648
ACP24008.1
Predicted aminotransferase, class I and II.
 
 
   0.645
ACP25271.1
Predicted oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.622
ACP24711.1
Putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.620
ACP24005.1
Capsule polysaccharide biosynthesis.
 
     0.616
ACP23817.1
FAD-linked oxidoreductase.
 
  
 0.560
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.