STRINGSTRING
NGR_c02090 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c02090" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c02090annotation not available (2500 aa)    
Predicted Functional Partners:
NGR_c02080
annotation not available (459 aa)
 
  0.933
accB
annotation not available (447 aa)
   
 
  0.849
NGR_c02060
annotation not available (539 aa)
 
     
  0.844
NGR_c02050
annotation not available (443 aa)
 
          0.838
NGR_c02100
annotation not available (407 aa)
 
     
  0.787
NGR_c18070
annotation not available (158 aa)
 
 
  0.764
NGR_c02070
annotation not available (267 aa)
 
 
  0.757
NGR_c09100
annotation not available (885 aa)
 
 
  0.751
NGR_c26080
annotation not available (710 aa)
   
 
  0.745
fadB
annotation not available (737 aa)
   
 
  0.745
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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